Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 769 a.a., Beta-barrel assembly-enhancing protease from Azospirillum sp. SherDot2

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 41  LGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHP 100
           LG      G + +A     +AL+  PD+  ++ ++     A+G +  AR  +RTAL+  P
Sbjct: 219 LGAALQGTGRLAEAESAYGEALRRQPDHAETRNNLGLLLHALGRHAEARGRFRTALALDP 278

Query: 101 KNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNARE 160
            +   L N G      GEY  A+++ RRA+ +      + ++ N G       +   A  
Sbjct: 279 CHVPALVNLGLAEAALGEYGRAERWQRRAIARDPGQ--AEAWNNLGNACKAQVRPVEAEA 336

Query: 161 YFKRAIDHDP 170
            +KRA+  +P
Sbjct: 337 CWKRALALNP 346



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 2/138 (1%)

Query: 35  AEARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRT 94
           A  R+ L       G++ +A     +A+    D      ++    +  G    A   Y  
Sbjct: 179 AATRVTLANALRRWGAVAEAATAYREAIGLGADTGSVWANLGAALQGTGRLAEAESAYGE 238

Query: 95  ALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGK 154
           AL   P +    NN G  L   G +  A   FR A+     ++   +  N GL     G+
Sbjct: 239 ALRRQPDHAETRNNLGLLLHALGRHAEARGRFRTALALDPCHV--PALVNLGLAEAALGE 296

Query: 155 TDNAREYFKRAIDHDPNR 172
              A  + +RAI  DP +
Sbjct: 297 YGRAERWQRRAIARDPGQ 314



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 4/156 (2%)

Query: 35  AEARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRT 94
           AE R+ +G    +      A      A +  P    +++++A+     G    A   YR 
Sbjct: 145 AEPRLGMGRALEDLRQAGAAIGCYRLAARLRPQDAATRVTLANALRRWGAVAEAATAYRE 204

Query: 95  ALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAV-EQPYYYLISASYENAGLCALKAG 153
           A+      G+V  N G  L   G    A+  +  A+  QP +   + +  N GL     G
Sbjct: 205 AIGLGADTGSVWANLGAALQGTGRLAEAESAYGEALRRQPDH---AETRNNLGLLLHALG 261

Query: 154 KTDNAREYFKRAIDHDPNRLLSILQLTKMEIEAGDY 189
           +   AR  F+ A+  DP  + +++ L   E   G+Y
Sbjct: 262 RHAEARGRFRTALALDPCHVPALVNLGLAEAALGEY 297



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 2/125 (1%)

Query: 7   LGLIIALAGCVTVTETA-GNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHA 65
           LG  +   G +   E+A G A +  P + AE R  LGL     G   +AR     AL   
Sbjct: 219 LGAALQGTGRLAEAESAYGEALRRQP-DHAETRNNLGLLLHALGRHAEARGRFRTALALD 277

Query: 66  PDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQY 125
           P +  + +++     A+GE   A +  R A++  P      NN G     Q     A+  
Sbjct: 278 PCHVPALVNLGLAEAALGEYGRAERWQRRAIARDPGQAEAWNNLGNACKAQVRPVEAEAC 337

Query: 126 FRRAV 130
           ++RA+
Sbjct: 338 WKRAL 342



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 33/183 (18%)

Query: 37  ARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTAL 96
           A + LGL     G   +A     +A+   P    +  ++ +  +A      A   ++ AL
Sbjct: 283 ALVNLGLAEAALGEYGRAERWQRRAIARDPGQAEAWNNLGNACKAQVRPVEAEACWKRAL 342

Query: 97  SEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAV-----EQPYYYLISASYENA------ 145
           + +P   + L N G  L  +  +  A    RRA+       P + +++ +   A      
Sbjct: 343 ALNPAFADALGNLGADLSDREAFAPATVQVRRAIRLMPGHAPMHAVLAYALNGAQRPVEA 402

Query: 146 ---------------------GLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTKMEI 184
                                GL   + G+ D  R +F+RA+   P   L+      + +
Sbjct: 403 DAACRRALALAPSLADPLCTLGLAEQRQGRADAGR-WFERAVAATPGHALARFNRGLLSL 461

Query: 185 EAG 187
           E G
Sbjct: 462 ERG 464