Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., Lipopolysaccharide assembly protein B from Acinetobacter radioresistens SK82

 Score = 66.2 bits (160), Expect = 6e-16
 Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 3/177 (1%)

Query: 9   LIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPDY 68
           L + L+  +       +    DP +  + R  L   Y+++G +  A+  L++AL+     
Sbjct: 12  LTVTLSALLVTACQTPDTLSKDPEKAVKVRTQLAAEYIKSGDLDAAKRALDQALEVDSRD 71

Query: 69  YRSQLSMAHYYEAVGEN---DSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQY 125
             + + M    +  G     D A   +R ++S  PKN    NN+G +L + G Y  A + 
Sbjct: 72  ATANMMMGVLLQQEGSQLNLDKAESYFRRSISIEPKNAQARNNYGAYLYQIGRYKDAIEQ 131

Query: 126 FRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTKM 182
              A     Y     + EN G   LK G   NA + FK+A+  + +  +S+L+L ++
Sbjct: 132 LEIAGATLGYEQRYQALENLGRIYLKLGNVANAEKTFKQALQANRDSSISMLELAEI 188



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 41  LGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMY 92
           LG  YL+ G++  A +  ++ALQ   D   S L +A  +    +  +A ++Y
Sbjct: 151 LGRIYLKLGNVANAEKTFKQALQANRDSSISMLELAEIFYLRQQIPAATQLY 202