Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 75/315 (23%), Positives = 128/315 (40%), Gaps = 29/315 (9%)

Query: 39  YAKQIPREQTVSVVNLDQSQASFQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGIL 98
           +++ I R+    VV+   SQ S QL R VDAT  + + Q   ++ +A QA    ++ G +
Sbjct: 42  FSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFM 101

Query: 99  VIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPM 158
           VIP  F K +   + P +    ++   LV   +   + QA GT  AQ  V + +      
Sbjct: 102 VIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHT 161

Query: 159 AFAAQHFS-PTSANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGHGYW 217
             AA   S P    + P FN    Y  ++V A+   + Q T++++  L++    + +G  
Sbjct: 162 TLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTILILAANYRHYGLK 221

Query: 218 SRVAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFV 277
           S +A + L  +   +L    YL      G  F +   + L  P  +       LLA +  
Sbjct: 222 SWLAQSPLTQLTRTLLP---YLPIFMLQGLGFLIWFYDVLRWP--MFGHFSTLLLAQSIT 276

Query: 278 GIALGAVTPRRELVTLVVLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLG 337
            +A                      +    F + L + PA  +  A  F  T     F+G
Sbjct: 277 VVA---------------------CVIMGAFFYFLTLDPARAMSFAGAF--TAPSFAFMG 313

Query: 338 LNQMAASWSTIAPKW 352
           +   A+  +T+A  W
Sbjct: 314 ITFPASDMNTLAQAW 328