Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  133 bits (335), Expect = 7e-36
 Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 18/371 (4%)

Query: 1   MTLFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQAS 60
           MT    F +    + T+  ++ T+   VV Y+F YP PY+ + PR+  V VV+ D S  S
Sbjct: 1   MTFDRAFLSTWHTILTSKTLLSTMLLAVVLYAFYYPAPYSHEAPRKLPVVVVDQDDSALS 60

Query: 61  FQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPT-LAYA 119
             +   +DAT  + +V     +A AK    + K  G+++I +   + L  G   + +A  
Sbjct: 61  RTMILDLDATRAIGVVNVVGNLATAKADMREGKADGVILISDGLERQLRAGTPGSGIAVW 120

Query: 120 GDASYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPR 179
            +A+Y L   TI E +      +A     +RL+  G+    A++   P +   +P FN  
Sbjct: 121 VNATYLLRASTIGEVVTAVIQNIAK----TRLIPGGQ----ASRGGPPVTVVKEPLFNRT 172

Query: 180 MGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGHGYWSRVAP---AKLLLVRSFVLVAV 236
            GY  YV P+V V+I+QQTL+      +G +++  G W   A      L    S  ++  
Sbjct: 173 GGYKGYVFPSVAVIIIQQTLLFGVATFMGGRRRA-GAWRMEASEFGGTLAAFSSVGILGC 231

Query: 237 YYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVVL 296
           Y+L     FG  F L GV        +I ++  F +A   +G+ +G+V  R E  T ++ 
Sbjct: 232 YFL-----FGLIFWLQGVPVDGNVLGMIIVVPIFAVAVAALGLLVGSVFDRGERATYMLG 286

Query: 297 ISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKWTLLW 356
            +S+P  F  G  +PL+ +P  +   +   PST  +  F+ LNQM A+   +A    +L 
Sbjct: 287 PTSVPFFFLTGATYPLDQMPGFVSVFSHLIPSTSGVHTFVPLNQMRATLGDVALPLLMLV 346

Query: 357 AQALVWGGLAF 367
           A A+ +  LA+
Sbjct: 347 ALAIGYSALAY 357