Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  172 bits (437), Expect = 1e-47
 Identities = 110/352 (31%), Positives = 182/352 (51%), Gaps = 3/352 (0%)

Query: 7   FKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQASFQLERM 66
           F A  +A+  +   ++ +F G + YSF YPLPY+++  ++  V+VV+ D S  S Q+ R 
Sbjct: 16  FVATWRAMLGDVGAIMLLFVGGIVYSFFYPLPYSRESVQQVPVAVVDQDLSAISRQITRY 75

Query: 67  VDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASYFL 126
           V A P V   +    + +A+      ++AG+L+IP+     +L G+   +  +G+  Y +
Sbjct: 76  VAAHPAVDTQRVTPDLREAQDLLWKNEIAGVLMIPQGLESKVLSGRRAEVDISGNGVYMM 135

Query: 127 VYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVDYV 186
           +    + GLA+A GT++A  ++ RL       A A     P + N    FN R GY  Y+
Sbjct: 136 MNKVALNGLAEAVGTVSAGIELKRLAAGTPSPAQAMAQRQPVNVNAVALFNVREGYGAYI 195

Query: 187 VPAVFVLILQQTLIMAAGLMVGTQKQGHGYWSRVAPAKLL-LVRSFVLVAVYYLLSLYYF 245
           VP V VLI+QQTL++A  L+ GT ++   +  R + A    ++ +F  VA  +  SLY+F
Sbjct: 196 VPGVAVLIIQQTLLLAITLLFGTWRERGAFPVRRSSAAYFGMLLAFATVA--FANSLYFF 253

Query: 246 GASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVVLISSMPLIFT 305
           G                L+     F L    +G+ LG++   RE    ++L +++P +F 
Sbjct: 254 GFVLWWQDYPRAGNFGGLLLFAALFALCVAALGMLLGSLFRTRERSVQLLLCTALPFMFL 313

Query: 306 AGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKWTLLWA 357
           +G  WP+E +P  L  L    PST  +QGF+ LNQ+ AS + +A +   L A
Sbjct: 314 SGLSWPVEALPPALQALRWLVPSTAGVQGFIALNQLGASLAQVATEAAALGA 365