Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., ABC transporter permease from Bacteroides stercoris CC31F

 Score =  154 bits (389), Expect = 4e-42
 Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 35/380 (9%)

Query: 3   LFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQASFQ 62
           LF ++K EL+ LF +  V++      + Y  +Y   Y  +  RE    VV+  +S  S +
Sbjct: 17  LFYVWKQELRNLFRDQGVLIFFVLVPLTYPLIYSFIYTNETVREVPAVVVDNSRSSLSRE 76

Query: 63  LERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDA 122
             R VDA+P+  IV     + +A+    ++K  GI+ IP  F  D++ GK   ++   D 
Sbjct: 77  YLRKVDASPETSIVAHCADMEEARLMLKERKAYGIIYIPSGFSDDIVRGKQTQVSIFCDM 136

Query: 123 SYFLVYGTIVEG-------------LAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTS 169
           S  L Y  ++               + +AG T A Q +++   IE E +A          
Sbjct: 137 SGLLYYKALLTANTNVSLAMNADIKMERAGNTTARQDEITAYPIEYEDIAI--------- 187

Query: 170 ANLKPTFNPRMGYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGHGYWSRV-------AP 222
                 FNP  G+  +++PAV +LI+QQTL++  GL  GT ++ + +   +         
Sbjct: 188 ------FNPTNGFAAFLIPAVLILIIQQTLLLGIGLASGTAREQNRFKELIPDDPHYNGT 241

Query: 223 AKLLLVRSFVLVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALG 282
            ++++ +      VY L+++Y       L  +N +A P+ L    LP+L AC F  +   
Sbjct: 242 FRIVMGKGLSYFMVYSLVAVYILCVVPRLFSLNQIAIPSVLALFALPYLTACIFFAMTAS 301

Query: 283 AVTPRRELVTLVVLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMA 342
                RE   L+ + +S+PL+F +G  WP   +P    + +  FPST  I G++ +N M 
Sbjct: 302 IAIRNRETCMLLFVFTSVPLLFLSGISWPGAAMPEFWRYFSYIFPSTFGINGYVRINSMG 361

Query: 343 ASWSTIAPKWTLLWAQALVW 362
           A+ + +A ++  LW Q  ++
Sbjct: 362 ATLNEVAFEYQALWIQTGIY 381