Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., putative multidrug ABC transporter permease YbhS from Xanthobacter sp. DMC5

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 72/338 (21%), Positives = 146/338 (43%), Gaps = 25/338 (7%)

Query: 10  IPRQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIRE 69
           I +++  LR D+  F+ +  +P+L  +   +  +    R LP  V    ++++SR ++  
Sbjct: 18  IVKEFIQLRRDRVTFATMIMIPLLQLILFGYAINT-TPRHLPTAVFTHENNEVSRAILAA 76

Query: 70  VDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMIL 129
           +  T+     +   S ++A   +R+ ++  F+ IPA F++A+ R + PQ+          
Sbjct: 77  LRNTAFFSFVREVKSAEDAEHMIRAGEVLFFVEIPAGFERALRRGDAPQL---------- 126

Query: 130 VGKLVNSAVVQAQGTFNAQVDV--MKNLATKTHTTLAAMGRS---VPVRTQITPLFNQNT 184
              LV +      G+ NA   +  + N A      + A G +   +    +  P      
Sbjct: 127 ---LVAADATDPVGSANALAALAGVVNSALVRERFVDAPGSAAFEIVQHRRYNPAGTSQL 183

Query: 185 NYAQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQ--SPLTQLTRTLLPYLPI 242
           N    +V  ++  +  +T+++ T L +        ++S L+    P+  +   + PY+ +
Sbjct: 184 N----IVPGLLGTILTMTMLIFTALSVTREIERGTMESLLSMPIHPVEIMLGKITPYVLV 239

Query: 243 FMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAG 302
            +LQ L  +     +   P+ G    L +A  + +V  + +G  F  L  +  +A+  + 
Sbjct: 240 GILQALLIMGAGMILFGVPLEGSAILLAVATLLFIVVNLSIGYTFSTLAQNQLQAVQMSF 299

Query: 303 AFTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEV 340
            F  PS    G  FP S M   AQ     LP++HY+ +
Sbjct: 300 MFFLPSILLSGFMFPFSGMPLWAQWIGEGLPLTHYLRM 337