Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 905 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 75/364 (20%), Positives = 145/364 (39%), Gaps = 32/364 (8%)

Query: 32  ILLAVSIWWIFSQGIARD---LPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEA 88
           +L A+ +  IF  GI+ D   L F + D   +  SR  +    ++            +E 
Sbjct: 559 LLGAMFMMVIFGYGISLDVENLAFAIYDQDQTPQSRAYLEGFRSSRYFAEQPPIRDSNEL 618

Query: 89  SQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQ 148
            + ++ ++I   + IP  F + +Y   QP V  +++  M    +           T    
Sbjct: 619 HRRLQRSEIKLALEIPPGFGRDLYAGRQPSVAAWFDGGMPFRAE-----------TSRNY 667

Query: 149 VDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTI 208
           V+ +     +    L+++ R+ P   ++   F  N +     V+AI P +  + +     
Sbjct: 668 VEAVHQENLQQLAELSSLPRNHPAAAKLETRFRYNQDVVS--VNAIGPGVMALILAFIPA 725

Query: 209 LILAANY---RHYGLKSWLAQSPLTQLTRTL---LPYLPIFMLQGLGFLI----WFYDVL 258
           ++ A      +  G  +    +PLT+L   L    PYL + ++  L  L+    W + V 
Sbjct: 726 MLTALGIVREKELGSITNFYATPLTRLEFLLGKQTPYLAVSLVN-LAVLVAMNRWLFGV- 783

Query: 259 RWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTA-PSFAFMGITFP 317
             P  G   TL     + V+A   MG      T     A+      T+ P+  F G+  P
Sbjct: 784 --PFKGSGLTLAFGGLLYVLATTSMGLLISAFTRTQIAAILGTMIITSLPTIQFSGLIVP 841

Query: 318 ASDMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQPMVNMWGYLLPL-GLALLLIR 376
            S +   A     L P  H++++ V   +  L+        + ++G+ +   GL+L++++
Sbjct: 842 RSSLEGAAALMGMLFPAGHFLDIAVGTFTKALDLRQLWPQCLALFGFFVGFTGLSLIMLK 901

Query: 377 KHLA 380
           K  A
Sbjct: 902 KQEA 905