Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 23/339 (6%)

Query: 5   KMKHAIPRQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSR 64
           ++K  + +++  L  D+  F  +  +P++  +   +  +  + R++P GVVD S S  SR
Sbjct: 6   RIKAVLVKEFRQLSRDRITFGMVVMIPLIQLLLFGFAINTDV-RNIPIGVVDQSDSSFSR 64

Query: 65  QLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYN 124
            L+  V  T  + V QH+ +V+EA +A+ S  I   +++P+       +Q +        
Sbjct: 65  LLVESVKVTQVIRVKQHYLTVNEAEKAIASGDIRAALILPSDLVARSQQQRELGQWLIDG 124

Query: 125 SQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNT 184
           S  ++ G L+                 +KN+      TL    + +    +IT L+N + 
Sbjct: 125 SDTMIAGALLG----------------LKNMPLTDLPTLGI--QPLTPTFEITLLYNPSR 166

Query: 185 NYAQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQSP---LTQLTRTLLPYLP 241
             A  +V  ++  +  +T+++ T   +    R  G    L  +P   +  +   ++PY+ 
Sbjct: 167 RSAVNIVPGLLGVILTMTMILFTSAAIVRE-RERGNLELLITTPVHSIELMIGKIVPYIF 225

Query: 242 IFMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFA 301
           + ++Q    L   + +   P+ G  S +L    + + A + +G     +     +AM   
Sbjct: 226 VGLIQVAIILGLGHFIFAVPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMT 285

Query: 302 GAFTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEV 340
                PS    G  FP   M T AQ    LLP +H++ +
Sbjct: 286 VFILLPSILLSGFMFPYEGMPTAAQWLSELLPATHFMRL 324