Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 79/365 (21%), Positives = 139/365 (38%), Gaps = 34/365 (9%)

Query: 32  ILLAVSIWWIFSQGIARD---LPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEA 88
           +L AV +  IF  GI+ D   L F V D   S  SR  +     +             E 
Sbjct: 560 LLGAVFMMVIFGYGISLDVENLAFAVHDQDQSPQSRAYLEAFRGSRYFAEQAPIRDSSEL 619

Query: 89  SQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQ 148
            Q ++ ++I   + IP  F + +Y   QP V  + +  M    +   + V          
Sbjct: 620 HQRLQRSEIKLALEIPPGFGRDLYAGRQPVVAAWLDGGMPFRAETSRNYVEAVH------ 673

Query: 149 VDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTI 208
                NL      +     R  PVR +    +NQ+       V+AI P +  + +     
Sbjct: 674 ---QANLEQLAKASPQPQPRQDPVRLETRFRYNQDV----VSVNAIGPGVMALILAFIPA 726

Query: 209 LILAANY---RHYGLKSWLAQSPLTQLTRTL---LPYLPIFMLQGLGFLI----WFYDVL 258
           ++ A      +  G  +    +PLT+L   L   +PYL + ++  L  L+    W + V 
Sbjct: 727 MLTALGIVREKELGSITNFYATPLTRLEFLLGKQMPYLAVSLVN-LALLVAMNRWLFAV- 784

Query: 259 RWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTA-PSFAFMGITFP 317
             P+ G    L       ++A   +G      T     A+      T+ P+  F G+  P
Sbjct: 785 --PLKGSVLALACGGVAYLLATTSLGLLISAFTRTQIAAILGTMIITSLPTIQFSGLIVP 842

Query: 318 ASDMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQP--MVNMWGYLLPLGLALLLI 375
            S ++  A     L P  +++++ V   +  L  L  L P  ++ +  +    GL+L ++
Sbjct: 843 RSSLDGAAAVMGQLFPAGYFLDIAVGTFTKAL-GLRELWPQCLILLSFFAAFTGLSLAML 901

Query: 376 RKHLA 380
           +K  A
Sbjct: 902 KKQEA 906