Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  191 bits (485), Expect = 3e-53
 Identities = 118/379 (31%), Positives = 191/379 (50%), Gaps = 4/379 (1%)

Query: 10  IPRQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIRE 69
           + R+W  LRHD W    LTW+P+ + + IWW+F+ GIARDLP  V+D   S LSR L+R 
Sbjct: 14  VRREWQRLRHDAWDLGMLTWIPLGVCLLIWWMFAAGIARDLPIVVIDRDQSSLSRSLLRM 73

Query: 70  VDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMIL 129
           VD +  + V+    +  EA+  +R  + YG +V+PA F   I       V+ FYN Q  +
Sbjct: 74  VDESPGVRVAAAVGNEAEATAWLRERRAYGLLVVPASFQHDIGAGRSATVSWFYNGQFSV 133

Query: 130 VGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQF 189
               +   V  A  T +A ++ M     +  +   A  +  P+R ++  L+N+N NY  F
Sbjct: 134 HAGGLTRDVRTAVSTLSAGIE-MTARGKRGASAAQAAEQFEPIRLRLGTLYNENANYESF 192

Query: 190 LVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQSP---LTQLTRTLLPYLPIFMLQ 246
           LV A++P++ QI + ++ I  +    R   +  WLA +     T +   L+     F +Q
Sbjct: 193 LVLALIPSMLQIFVALAAITAVGRELRAGSVPQWLASAGGRWHTAVAGKLVIPAAAFAVQ 252

Query: 247 GLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTA 306
            + F+++F  V  W + G    ++    + + A + +G     +TL    A+S A   TA
Sbjct: 253 AVLFVVFFGFVRGWAIEGSGLMIVAGLWLLIAAYLGLGLLMIAVTLTLRNALSAAAFVTA 312

Query: 307 PSFAFMGITFPASDMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQPMVNMWGYLL 366
           P+FAF G  +P S M  LA+AW   LP++HY+++Q      G      +   + + G+ +
Sbjct: 313 PAFAFSGQGYPLSAMPALARAWAEALPLTHYLQLQGKHWLAGAPWTYGVGDALVLLGFAV 372

Query: 367 PLGLALLLIRKHLAREMGA 385
             G A LLI K  A +  A
Sbjct: 373 VSGGAGLLILKQRAGQASA 391