Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

 Score = 57.0 bits (136), Expect = 9e-13
 Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 18/291 (6%)

Query: 48  RDLPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQF 107
           R+LP  +VD   +QLSR+L    D+T  + +     ++DEA   +   +  G + IP  F
Sbjct: 46  RELPVVLVDEDGTQLSRRLAFMADSTPEVHLVAQRNTLDEAKTLLLEGEAKGILYIPRHF 105

Query: 108 DKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMG 167
            + I + +   V+   ++   L+   +  ++    GT  AQV V + LA +     AA  
Sbjct: 106 YRDIMQGKSVTVSYSADASYFLIYGAIAQSLATVGGTAGAQVKVARLLA-QGEGIPAASS 164

Query: 168 RSVPVRTQITPLFNQNTNYAQFLVSAI-VPALWQITIVVSTILILAANYR-HYG-LKSWL 224
           +         P+FN    Y  ++V  + +  L QI ++   +L    N R  +G ++ W 
Sbjct: 165 QWQATALNAVPVFNPTMGYVDYVVPGVFMLILHQILLMGCGLLGAGQNQRTQFGEVRYWQ 224

Query: 225 AQSP-LTQLTRTLL---PYLPIFMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSI-TVVA 279
             +P    L RTL+    YL + +L  LGF +  Y + R           L   + T+  
Sbjct: 225 YATPWRLLLARTLVVGGAYL-LSLLYMLGFCLDAYGIAREASMSQLLLFALPFLLSTLWL 283

Query: 280 CVIMGAFFYFLTLDPARAMSFAGAFTAPSFAFMGITFPA----SDMNTLAQ 326
            V++GA F    L P++A+  +   + P     G  +P     + +N LAQ
Sbjct: 284 GVVLGAAFTRKDL-PSQAVLLS---SIPIVFLSGFIWPVEMIPAPLNWLAQ 330