Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 73/353 (20%), Positives = 145/353 (41%), Gaps = 22/353 (6%)

Query: 29  WVPILLAVSIW-WIFSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDE 87
           W+ ++L++ +   +++     DLP GV+D  HS  SRQLIR++DATS + + + + S+++
Sbjct: 21  WLMLILSLCVMSMVYANRTVWDLPVGVIDQDHSTASRQLIRQLDATSKIAI-ETYDSLEQ 79

Query: 88  ASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNA 147
           A + +   +++  +++P   +K I   +   V  + ++   L    +   VV A      
Sbjct: 80  AQRDLGWRKLFAVIIMPVDLEKKILSGQNIVVPVYGDATNRLANGQIQQDVVAAYQQLLT 139

Query: 148 QVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVST 207
           Q +    L     +   A     P+  Q   +FN   ++A  +   ++  L Q +++++ 
Sbjct: 140 QYN-NGLLLRSGFSERQAQVILTPIVGQTLDVFNPGISFAAIIFPGLLVMLLQHSLLIAC 198

Query: 208 ILILAANYRHYGLKSWLAQSPLTQLTRTLLPYLPIFMLQGLGFLIWFYDVLRWPMFGHFS 267
           + +  A     G      ++PL      L   LPI++   +   + +  VL +      +
Sbjct: 199 VRVSIAMKSMPG-----GKAPLAAHLGGLTALLPIWLFLSIVLFVLWPWVLGYRQTAGIA 253

Query: 268 TLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTAPSFAFMGITFPASDMNTLAQA 327
            +LL     ++A + +G                    T P F   G  +P   M    +A
Sbjct: 254 EILLLTFPFLLAVLGLGKLVTECLRSVEMIYLTLAFITTPIFYLSGTIWPLQAMPGWVRA 313

Query: 328 WRNLLPISHYIE--VQVNQVSYGLEALSSLQPMVNMWG---YLLPLGLALLLI 375
               +P +   +    VNQ+   L           +WG    LL LG+   L+
Sbjct: 314 ISYSIPSTWATKAVAGVNQMGLSLN---------EVWGDVAMLLVLGIVYTLL 357