Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 96/371 (25%), Positives = 162/371 (43%), Gaps = 43/371 (11%)

Query: 27  LTWV-PILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASV 85
           L+W+ P++L   I   FS+G   DLP  VVD  HS LS+ L R +DA S   V  +   +
Sbjct: 33  LSWIFPLILFGLISSNFSEGTLLDLPVSVVDSDHSPLSKSLTRRLDAGSHAHVEAYPGGL 92

Query: 86  DEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTF 145
            E+   +RS Q Y  + +P  F+      +QP V  +YN            A+    G +
Sbjct: 93  QESLHRLRSAQDYALLYVPPDFEANALAGKQPSVVMYYN------------ALFYGAGLY 140

Query: 146 NAQ--VDVMKNLATKTHTTLAA-MGRSVPVRTQIT----PLFNQNTNYAQFLVSAIVPAL 198
           + Q    +M  +     + +A  MG+++P    +T     LFN + +Y  +   A    L
Sbjct: 141 STQDFSGLMTEINASYRSIIAGEMGKTLPPLADVTLSYGSLFNASGSYIYYQQFAATIHL 200

Query: 199 WQITIVVSTILILAANYRHYGLKSWLAQSPLT-QLTRTLLPYLPIF---MLQGLGFLIWF 254
            Q+ +V   I +LA +      KS L   P +  L   L PY   F   ++  +  L+  
Sbjct: 201 LQLFVVTCMIYVLARS------KSLLKARPFSLALLGKLAPYTLCFTSLLMVEIAALVGI 254

Query: 255 YDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTAPSFAFMGI 314
           +D     + G+   +L+     V+A   +G   +  T     A S      + +  F G+
Sbjct: 255 FDA---RVSGNPLFMLMIGFFYVMAAQSIGLLLFTFTSSTITAYSLIAILVSIALTFSGM 311

Query: 315 TFPASDMNTLAQAWRNLLPISHYI----EVQVNQVSYGLEALSSLQPMVNMWGYLLPLGL 370
             P   M   A+   N+ P++H +    +V + QV     A+ S+  +++++    PL  
Sbjct: 312 AVPELSMPLPARIISNIEPLTHALYAMFDVFLRQVP--ASAIFSVCALLSIY----PLVT 365

Query: 371 ALLLIRKHLAR 381
           ALL+  + LAR
Sbjct: 366 ALLVRNRLLAR 376