Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., ABC transporter permease from Erwinia tracheiphila SCR3

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 82/372 (22%), Positives = 148/372 (39%), Gaps = 42/372 (11%)

Query: 17  LRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTL 76
           LR DK   S +   P+   V + +  +   AR++P  ++++   + S+  +     T   
Sbjct: 9   LRRDKVSLSMVFLTPLFQLVILGYAVNMD-ARNIPTALLNYDTERFSQVFVTAAQNTDYF 67

Query: 77  LVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNS 136
            +   +AS DEA +A    ++   + IPA F K I R E+P +             L+ S
Sbjct: 68  AMKP-YASADEAEKAFMQGKVLFIVTIPAGFTKKILRGEKPSL-------------LIQS 113

Query: 137 AVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITP----------LFNQNTNY 186
             +    T NA       L+     ++A     +P   QI            +FN     
Sbjct: 114 DAIDPVATGNA-------LSAIVQASVAMFKHDLPEPLQIEQANDFELIIHRMFNPEGIT 166

Query: 187 AQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQSPLTQL---TRTLLPYLPIF 243
               +  I+ ++   T+++ T L +    R  G    L  SP+T L      + PY+ I 
Sbjct: 167 QYNTIPGIIGSILSTTMILMTALAITRE-RENGAIENLLVSPVTGLEVVMGKITPYVLIG 225

Query: 244 MLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGA 303
           + Q +  L     +   P+ G+   L +   + +  C+ +G     L  +  +A+  +  
Sbjct: 226 LFQSVIILACAVFLFEIPLLGNVLLLFIVLIVYISLCLSIGITISSLAQNQLQALQMSSF 285

Query: 304 FTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQPMVNMWG 363
           +  PS    G   P   M   AQ   + LP++++I +    +  G   +S L        
Sbjct: 286 YFIPSVMLSGFISPFISMPIWAQGIGSCLPLTYFIRLVKGIMLKGYSFMSLLP------D 339

Query: 364 YLLPLGLALLLI 375
           +L  LGLA+L+I
Sbjct: 340 FLALLGLAVLVI 351