Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., ABC transporter permease from Bacteroides stercoris CC31F

 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 67/344 (19%), Positives = 141/344 (40%), Gaps = 23/344 (6%)

Query: 6   MKHAIPRQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQ 65
           +K+ I +++  L  + +L   +   P ++ + + W  +  I +++   VVD   S +SR+
Sbjct: 2   IKYLIEKEFKQLFRNSFLPKLIFIFPCMIMILMPWAANLEI-KNINLNVVDNDRSVVSRR 60

Query: 66  LIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNS 125
           L+ ++ A++   ++    + DEA   + +      + IP  F+K     + P++    N+
Sbjct: 61  LVDKLGASTYFRLTALPDTYDEALYGIEAGTADVILEIPRDFEKDWINGKAPRLLVAANA 120

Query: 126 QMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTN 185
                G L  S +    G +  ++     +       L  +G S         L+N   N
Sbjct: 121 VNGTKGSLGGSYLSAIIGDYTRELKSEMAVRPLADKPLPRIGIST------LNLYNPTLN 174

Query: 186 YAQFLVSAIVPALWQITIVVSTILIL-AANYRHYGLKSWLAQSPLTQLTRTLLPYLPIFM 244
           Y  F+V A++  L  +T++   +  L     +  G    +  +P+ + T      +P ++
Sbjct: 175 YKLFMVPALMVML--LTLICGFLPALNVVGEKEAGTIEQINVTPVGKFTFITAKLIPYWL 232

Query: 245 LQGLGFLIWFYDVLRWPMF-----GHFSTLLLAQSITVVACVIMGAFFYFLTLDPA---R 296
           +  +   I F  VL W ++     GHF T+       ++   ++  F   ++   A   +
Sbjct: 233 IGFVVLTICF--VLAWLLYGILPAGHFFTI---YGFALIFLPVVSGFGLVISNHSATLQQ 287

Query: 297 AMSFAGAFTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEV 340
           AM     F        G+  P   M   AQ    + P+ +++EV
Sbjct: 288 AMFVMWFFMLVLILLSGLFTPVHSMPEWAQWITRINPLRYFVEV 331