Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 821 a.a., ABC transporter permease from Bacteroides stercoris CC31F

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 83/385 (21%), Positives = 157/385 (40%), Gaps = 41/385 (10%)

Query: 24  FSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFA 83
           F     +P+     +  IF  G   ++P G+VD  ++  SR + R + AT T  V++HF 
Sbjct: 22  FGVCILLPLFCLFFMATIFGNGQMENIPIGIVDQDNTAASRTIARRIAATPTFRVTEHFT 81

Query: 84  SVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSA------ 137
                 QA++  +IYG++ IP QF++         +T +Y+  ++ VG  + +A      
Sbjct: 82  DEASTRQALQRKEIYGYLSIPPQFEQKTVSGTGATLTYYYHYALLSVGSELMAAFETTLA 141

Query: 138 -------VVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFL 190
                  VVQA+     Q  +   L              +PV     PL+N + +Y+ +L
Sbjct: 142 PVALSPIVVQAEALGVGQEQIQTFL--------------LPVEANTHPLYNPDMDYSIYL 187

Query: 191 VSAIVPALWQITIVVSTILILAANYRHYGLKSWL-AQSP-------------LTQLTRTL 236
                  L+QI I++ T+  + + ++    + W+ A +P             LT +   L
Sbjct: 188 SQPFFFVLFQILILLVTVYAIGSEFKFGTTQEWMGAATPAGKDPANLRNADMLTAVAGKL 247

Query: 237 LPYLPIFMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPAR 296
           LPY  +F + G+      + ++  P  G    + +   + ++A   +    + +    A 
Sbjct: 248 LPYTVMFSVIGILANYVLFGLMNIPFQGSLWLMNIVTVLFIMATQALAVLIFSIFPKIAY 307

Query: 297 AMSFAGAFTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQ 356
            +S      +      G+TFP + M     A   L P+ H+ E     + +        Q
Sbjct: 308 IISVVSMVGSLGATLSGVTFPVTAMYAPVHAASYLFPVRHFTEATQAMIYFDAGFAYFWQ 367

Query: 357 PMVNMWGYLLPLGLALLLIRKHLAR 381
            +  +  +LL   L L L++  + R
Sbjct: 368 SVAVLLVFLLLAILILPLLKWWILR 392



 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 83/383 (21%), Positives = 156/383 (40%), Gaps = 42/383 (10%)

Query: 3   ELKMKHAIPRQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQL 62
           E  + + I  +W  +  +  +   L     L  +   ++++  + R  P  VVD SHS L
Sbjct: 428 EASLSNVIRHEWKAIATNPAILLVLAGGIFLYGLLYNYMYAPNLVRKAPVAVVDLSHSAL 487

Query: 63  SRQLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTF 122
           SR+ +R +DA     V      + EA + M+  ++ G + IP+ F+  + R E    T +
Sbjct: 488 SREYVRWLDAAPQTSVYAQTPDILEAREWMKKGEVTGILYIPSDFETHVARGETSVFTLY 547

Query: 123 YNSQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTT-------LAAMGRSVPVRTQ 175
             +   L  K +  A        +++V +  N A +   T       L A+  S PV   
Sbjct: 548 AATDAFLNFKGLQEA--------SSRVMLAVNDAHRCAGTVFLPPQGLLAVASSTPVNVS 599

Query: 176 ITPLFNQNTNYAQFLVSAIVPALWQITIVVSTILIL-------AANYRHYGLKSWLAQSP 228
            T L+N    Y  +L+ A++     I I+  T+L++        A  R  G+ S  A+S 
Sbjct: 600 GTALYNYTEGYGSYLIPAVM-----IVIIFQTMLMVIAMLTGEEAEQRREGIHSMRARSL 654

Query: 229 LTQLT----RTLLPYLPIFMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMG 284
              L     RT + Y+ ++++  +  L     +   P  G    +     +T++   ++ 
Sbjct: 655 KDMLCIVSGRTFV-YVMLYVVFSMFLLGLLPHIFSIPNIGSGWDI-----VTMMIPFLLA 708

Query: 285 AFFYFLTLD----PARAMSFAGAFTAPSFAFM-GITFPASDMNTLAQAWRNLLPISHYIE 339
             F+ L +      + A     AF +  + F+ G+++P   M    QA   + P++  + 
Sbjct: 709 TSFFALAVSRWFTDSEAPLLMIAFFSVGYIFLSGVSYPLELMPWYWQAAHYVFPVAPAVL 768

Query: 340 VQVNQVSYGLEALSSLQPMVNMW 362
             V   S G         M+ +W
Sbjct: 769 AFVKLNSMGGSLADIWPQMLTLW 791