Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., ABC transporter permease from Bacteroides stercoris CC31F

 Score = 78.2 bits (191), Expect = 4e-19
 Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 29/356 (8%)

Query: 17  LRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTL 76
           L  D+ +      VP+   +   +I++    R++P  VVD S S LSR+ +R+VDA+   
Sbjct: 28  LFRDQGVLIFFVLVPLTYPLIYSFIYTNETVREVPAVVVDNSRSSLSREYLRKVDASPET 87

Query: 77  LVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNS 136
            +  H A ++EA   ++  + YG + IP+ F   I R +Q QV+ F +   +L  K + +
Sbjct: 88  SIVAHCADMEEARLMLKERKAYGIIYIPSGFSDDIVRGKQTQVSIFCDMSGLLYYKALLT 147

Query: 137 AVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVP 196
           A        NA  D+    A  T T       + P+  +   +FN    +A FL+ A++ 
Sbjct: 148 ANTNVSLAMNA--DIKMERAGNT-TARQDEITAYPIEYEDIAIFNPTNGFAAFLIPAVLI 204

Query: 197 ALWQITIVVSTILILAANYRHYGLKSWLAQSPLTQLTRTLLPYLPIFMLQGLGF-----L 251
            + Q T+++   L           K  +   P    T        I M +GL +     L
Sbjct: 205 LIIQQTLLLGIGLASGTAREQNRFKELIPDDPHYNGT------FRIVMGKGLSYFMVYSL 258

Query: 252 IWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYF-----LTLDPARAMSFAGAFTA 306
           +  Y +   P     + + +   + + A   + A  +F     + +           FT+
Sbjct: 259 VAVYILCVVPRLFSLNQIAIPSVLALFALPYLTACIFFAMTASIAIRNRETCMLLFVFTS 318

Query: 307 PSFAFM-GITFPASDMNTLAQAWRNLLP----ISHYIEVQ-----VNQVSYGLEAL 352
               F+ GI++P + M    + +  + P    I+ Y+ +      +N+V++  +AL
Sbjct: 319 VPLLFLSGISWPGAAMPEFWRYFSYIFPSTFGINGYVRINSMGATLNEVAFEYQAL 374