Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 945 a.a., Ribosome-associated ATPase from Azospirillum sp. SherDot2

 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 78/353 (22%), Positives = 139/353 (39%), Gaps = 25/353 (7%)

Query: 30  VPILLAVSIWWIFSQGIARD---LPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVD 86
           V +L  V +  +F  GI  D   L F V+D   S  SR  I + D + +   +       
Sbjct: 598 VALLGTVLLMLVFGFGITMDVENLTFAVLDHDRSPESRAYIEQFDGSRSFRATPPAVDAH 657

Query: 87  EASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFN 146
           + +  ++  +    + IP  F + + R   P+V    +  M    + +   V      F 
Sbjct: 658 DLALRLQRGEASLTIEIPEGFGRELRRGRIPEVAVRIDGAMPFRAETIQGYVAGLHQRF- 716

Query: 147 AQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVS 206
                +++ AT +   L A   ++ +R +    F          + A+VPA   + +V  
Sbjct: 717 -----IQDAATASGIALPAAPATLEMRYRYNQAFRS--------LDAMVPATIGLLLVFI 763

Query: 207 TILILAANY---RHYGLKSWLAQSPLTQLTRTL---LPYLPIFMLQGLGFLIWFYDVLRW 260
             ++ A      +  G  + L  +P+T+L   L   LPY+ +     L  +     +   
Sbjct: 764 PAILAALGVVREKELGSITNLYVTPVTRLEFLLGKQLPYIGLAAFNLLLMVAMAVTLFGV 823

Query: 261 PMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTA-PSFAFMGITFPAS 319
           P+ G    LLL   + VVA   +G      T     A+      T  P+  F G+  P +
Sbjct: 824 PVKGSLFGLLLGGLVYVVATTALGLLISVFTATQTAAVFGTAIVTMLPATQFSGMLQPVA 883

Query: 320 DMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQPMVNMWGYLLPLGLAL 372
            +   A  +  L P +H++++ V   + GL AL  L P +      +P+ LAL
Sbjct: 884 TLEGGAWLFGTLFPTTHFLKLSVGAFTKGL-ALPELIPFILATAAFVPVFLAL 935