Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., putative multidrug ABC transporter permease YbhS from Azospirillum sp. SherDot2

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 65/336 (19%), Positives = 139/336 (41%), Gaps = 21/336 (6%)

Query: 12  RQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVD 71
           +++  +R D+  F+ +  VPIL  +   +  +    + LP  ++    S  +R L+  ++
Sbjct: 15  KEFIQMRRDRLTFAMMVGVPILQLILFGFAINSD-PKALPTALLVADSSPFARTLVAAME 73

Query: 72  ATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVG 131
            +    +++  AS  E  + +   ++   + IP  F + + R  +P +            
Sbjct: 74  NSRYFAITRSAASEAEIDRLLAEGEVQFAVTIPPGFARDLQRGTRPVL------------ 121

Query: 132 KLVNSAVVQAQGTFNA--QVDVMKNLATKTHTT--LAAMGRSV-PVRTQITPLFNQNTNY 186
            LV +       T NA   +  +   A     T  LA++   + PV  ++   +N     
Sbjct: 122 -LVEADATDPAATSNALSALTAIARQALNPDLTGPLASLRTGLDPVDLRVHRRYNPEGIT 180

Query: 187 AQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQS--PLTQLTRTLLPYLPIFM 244
              +V  ++  +  +T+V+ T L +        +++ LA    P   +   ++P++ +  
Sbjct: 181 QYNVVPGLMGVVLTMTMVMMTALAVTRERERGTMENLLAMPVRPFEVMLGKIVPFVVVGY 240

Query: 245 LQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAF 304
           +Q L  ++    +   P+ G    L     + + A + +G  F  L  +  +AM  +  F
Sbjct: 241 VQVLLIVVAARLLFDVPIVGSLGLLSAVLILFIAANLAVGFTFSTLARNQLQAMQMSFFF 300

Query: 305 TAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEV 340
             PS    G  FP   M   AQA   +LP++H++ +
Sbjct: 301 FLPSMLLSGFMFPFRGMPGWAQAVGEILPLTHFLRI 336