Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 5/235 (2%)

Query: 9   MTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKG 68
           ++L A+A     G+ + +     P++    I +   +I++ VPGRI  +   +   V KG
Sbjct: 24  VSLAALAGAVLFGWSYVRNATLNPLSQDAVITADTVNIAAAVPGRIAAIHAAENGSVRKG 83

Query: 69  QLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQA--AKDQWLKAQAAAELA 126
           +L+F L +     + EQA A  K A A   +       +Q  A  A++Q  +A++  +LA
Sbjct: 84  ELLFALDATTYRLQAEQAAADLKIAEAALADRRRSIAAEQSNAIIAQEQVARARSNLDLA 143

Query: 127 EKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEK 186
            +T  R+  L   G VS Q+ D+A T  + A+ +   ALQ    A          AA+  
Sbjct: 144 SQTLARLEALRPKGYVSAQQVDDAATAKRDAEISLKQALQQQAAADALVSNAAAAAAVVD 203

Query: 187 ARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
           AR AA A+A  E   ADT++++ FDG+V  +    G     G  + T+++T D W
Sbjct: 204 ARRAALALA--ERGLADTEVRAPFDGKVVGLDQSPGGFVISGQSLFTLINT-DAW 255