Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., hemolysin secretion protein D from Pseudomonas simiae WCS417

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 34/310 (10%)

Query: 11  LTAVAVVGWI----GYRFYQAYQ---PEPVTL-QGQIESQQYSISSKVPGRIDQVLVRKG 62
           L A+A++G +    G+ ++++ Q   PE +++  G++ES +  I++K+PGR+ +V V +G
Sbjct: 10  LFAIALIGLLLGAGGFGYWRSTQDRLPEGLSMGNGRLESTEVQIAAKIPGRLAEVRVDEG 69

Query: 63  DQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAA 122
           D+V KGQL+       +D +  +A   Q  A  L  +    A E  +Q  + + L     
Sbjct: 70  DKVLKGQLL-----ARMDTRTLEAQRAQAEAEVLRAKENFAAAEANVQLRQSEQL----- 119

Query: 123 AELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQA 182
             LA +   R   LY  G  S Q  D    Q QA + T +AA+   Q     A+  + +A
Sbjct: 120 --LANQELRRTQELYKRGFASSQLID----QQQARQNTGNAAVVAAQ-----AQVASVKA 168

Query: 183 ALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWA 242
           A+  A+     VA++ +   D+ +++  DG +   L   GE+   G  V+ ++D  D + 
Sbjct: 169 AIGAAQ---AQVAQLTSEIDDSSLRAPIDGIIQLRLAEPGEVLGAGGRVLLLIDPNDQYM 225

Query: 243 VFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTF 301
              +   +    T G+     L AL ++ +  K++ VA    F T +  +         F
Sbjct: 226 NLYLPASVTGRLTVGSDARILLDALPDQPLPAKISFVAAKSQF-TPKEVETRDERQKLVF 284

Query: 302 EVEARPVTPT 311
            V+ R   P+
Sbjct: 285 RVKLRLTQPS 294