Pairwise Alignments
Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056
Subject, 321 a.a., hemolysin secretion protein D from Pseudomonas simiae WCS417
Score = 79.0 bits (193), Expect = 1e-19 Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 34/310 (10%) Query: 11 LTAVAVVGWI----GYRFYQAYQ---PEPVTL-QGQIESQQYSISSKVPGRIDQVLVRKG 62 L A+A++G + G+ ++++ Q PE +++ G++ES + I++K+PGR+ +V V +G Sbjct: 10 LFAIALIGLLLGAGGFGYWRSTQDRLPEGLSMGNGRLESTEVQIAAKIPGRLAEVRVDEG 69 Query: 63 DQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAA 122 D+V KGQL+ +D + +A Q A L + A E +Q + + L Sbjct: 70 DKVLKGQLL-----ARMDTRTLEAQRAQAEAEVLRAKENFAAAEANVQLRQSEQL----- 119 Query: 123 AELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQA 182 LA + R LY G S Q D Q QA + T +AA+ Q A+ + +A Sbjct: 120 --LANQELRRTQELYKRGFASSQLID----QQQARQNTGNAAVVAAQ-----AQVASVKA 168 Query: 183 ALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWA 242 A+ A+ VA++ + D+ +++ DG + L GE+ G V+ ++D D + Sbjct: 169 AIGAAQ---AQVAQLTSEIDDSSLRAPIDGIIQLRLAEPGEVLGAGGRVLLLIDPNDQYM 225 Query: 243 VFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTF 301 + + T G+ L AL ++ + K++ VA F T + + F Sbjct: 226 NLYLPASVTGRLTVGSDARILLDALPDQPLPAKISFVAAKSQF-TPKEVETRDERQKLVF 284 Query: 302 EVEARPVTPT 311 V+ R P+ Sbjct: 285 RVKLRLTQPS 294