Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 65/296 (21%)

Query: 46  ISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKL-----EQAIAGQKAAGALAQEA 100
           ++S + G + ++ VR  D+VE G ++ T+ +P I+  +      Q +A Q     L  + 
Sbjct: 77  VTSPISGVVTRMTVRALDKVEAGAVVATVQNPTINRDILTTLTTQRLALQSQVAQLTNQI 136

Query: 101 ENGAREQQ-------------IQAAKDQWLKAQAAAELA-------EKTYLRVNNLYNDG 140
              + E Q             +   +D W  AQ   E+A       E+   R + + ++G
Sbjct: 137 NASSDELQFVEQQVKLYRTASMAQTRDAWQVAQRQREVAQSNVAEQEQKVRRTSAMLDEG 196

Query: 141 VVSEQKRDEAQTQWQAAKYTESAALQMYQ--------------LAKEGA--------REE 178
            VS Q  D AQ Q   ++   + A Q Y               +   GA        R E
Sbjct: 197 AVSPQAMDAAQAQLSTSRANAAVAEQAYTGLGQSMASASRGVFVGSGGASVYQTLANRRE 256

Query: 179 TKQAALEKARMAAGAVA----EVEAYAADTK----------IQSWFDGEVSQVLMHSGEL 224
           T    +E+A+  + A+     EV A  A+ +          +++   G+V+ VLM  G  
Sbjct: 257 TLSGGIERAQHDSEALRQQLREVTALEAEERSRIDRMAAFEVRATQPGQVNSVLMPQGSF 316

Query: 225 APQGFPVVTVVDTQ--DTWAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHV 278
            PQG  +V + D    +  AVF  R  L K    G+            +  +VT +
Sbjct: 317 VPQGATLVRMTDCSRIEVVAVFPPR--LAKKLNMGSTIAVKTDDGRPEVSARVTQL 370