Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family from Variovorax sp. SCN45

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 18/124 (14%)

Query: 30  PEPVTLQGQIESQQYSISSKVP---GRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQA 86
           P  V+L   +E+   S  + +P   G++ ++ VR GD V++GQ++ T+ SP+    L QA
Sbjct: 77  PHDVSLPATVEANPASTVNVLPPLTGKLAELKVRLGDTVKRGQVLATMTSPD----LAQA 132

Query: 87  IA-GQKAAGA--LAQEA---ENGAREQQIQAAKD----QWLKAQAAAELAEKTYLRVNNL 136
           ++  QKA  A  LAQ A     G  E    AAKD    Q   AQ  AEL  ++  R+ +L
Sbjct: 133 VSDAQKARDALDLAQRALVRARGVNEAGSNAAKDVEAAQSAVAQQTAEL-RRSETRLRSL 191

Query: 137 YNDG 140
             DG
Sbjct: 192 GADG 195