Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Variovorax sp. OAS795

 Score = 80.1 bits (196), Expect = 7e-20
 Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 7/325 (2%)

Query: 4   VKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGD 63
           +   ++ L A A   W  +R   A     + L G ++ +Q S++     R+ ++ VR+GD
Sbjct: 7   IAAAVLVLAAAAGGWWYAHR--SAEPSSQLVLYGNVDLRQVSLAFNANERVAELAVREGD 64

Query: 64  QVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAA 123
           +V  GQL+  L +  +  ++ Q+ A            + G+R +++  A  Q   AQA A
Sbjct: 65  RVRAGQLLGRLDTRSLALRVAQSQARIGVQEQALLRLKTGSRPEELAQAGAQVAAAQADA 124

Query: 124 ELAEKTYLRVNNLYNDGV---VSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETK 180
           +LA++   R+ ++        VS+Q  D AQ + + A        +  QLA  G R+E  
Sbjct: 125 DLAQQQLARLQSIGQTTAGRAVSQQDLDSAQARRKVALAQLDNVRRAQQLAVAGPRKEDI 184

Query: 181 QAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT 240
             A  +   A   +A +    A+ ++++  D  V   L+  G++A    P  T+  T   
Sbjct: 185 AQAQAQLESARADLALMNHQLAEAELKAPIDAVVRARLLEPGDMASPQRPAFTLAITDPK 244

Query: 241 WAVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLR 299
           W    V E  L     G +      +   + I  KV +++ + +F T ++    +     
Sbjct: 245 WVRAYVAEPDLGRVQPGQEARVTTDSQPGQPIMGKVGYISSVAEF-TPKTVQTEELRSSL 303

Query: 300 TFEVEARPVTPTEGLRMGMSVVVKL 324
            +E+        + LR+GM   V+L
Sbjct: 304 VYEIRVMVDDREDRLRLGMPATVRL 328