Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 65/257 (25%), Positives = 103/257 (40%), Gaps = 53/257 (20%)

Query: 1   MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVR 60
           MK   +   TL  +A+  WIG   +  Y   P T  G++ +   ++++ V G +  V V 
Sbjct: 1   MKKFFSLFATLLVLAIALWIGRALWVDYMDTPWTRDGRVRADIINVAADVSGTVVDVPVH 60

Query: 61  KGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQ 120
               V++G L+  +  PE        IA ++A   LA      +R+   +  K   L A+
Sbjct: 61  DNQWVKRGDLLMQI-DPE-----HYRIAVKQAQALLA------SRKATWEMRK---LNAR 105

Query: 121 AAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETK 180
             A++ E             V+S + RD+A           ++AL  YQLA         
Sbjct: 106 RRADMDEL------------VISAENRDDASN-------VATSALADYQLA--------- 137

Query: 181 QAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT 240
           QA LE A          E   + T++ +  DG V+ + +H G+ A  G   + VVD    
Sbjct: 138 QAQLEAA----------ELNLSRTRVLAAVDGYVTNLNVHRGDYARIGEAKMAVVDMNSF 187

Query: 241 WAVFNVREDLLKHFTQG 257
           W      E  L H   G
Sbjct: 188 WVYGFFEETKLPHLKVG 204