Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., HlyD-like membrane fusion protein YhiI from Sphingobium sp. HT1-2

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 11/303 (3%)

Query: 14  VAVVGWIGYRFYQAYQPEP-----VTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKG 68
           VA V  I +  +   +P       V   G++E+ +  ++SK  GRI  ++  +G  V+ G
Sbjct: 14  VAAVAGIAFLLWTLLKPAGLPEGIVGGNGRLEATEIDVASKSAGRIKDIVADEGQLVKAG 73

Query: 69  QLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAEL--A 126
           +++  +    +DA+  +A+A    A      A+    +++ + A  Q +  Q  AEL  +
Sbjct: 74  EIVAHMDVDVLDAQRTEAVAQLAEAQNAVLVAQTQVAQRESEKAAAQAVVRQRIAELNAS 133

Query: 127 EKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEK 186
            K   R   L  +G  + Q+RD+   Q + A     AA      A+        Q    +
Sbjct: 134 RKRLARSETLAREGATAVQERDDDAAQTEGAAAAVEAARAQLASAEVAITNARNQVIGSR 193

Query: 187 ARMAAG--AVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVF 244
           +R+ AG   +  +EA   D+ +++  DG V   +   GE+   G  V+++VD  D    F
Sbjct: 194 SRVEAGRATIQRIEADINDSSLRAPRDGRVQYRVAQPGEVVTAGGRVLSLVDLSDVTISF 253

Query: 245 NVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEV 303
            +          G++    L A+ +  I  +++ VA +  F T ++ +     +   F V
Sbjct: 254 FLPATAAGRVAIGSEARIVLDAIPDYPIPARISFVADVAQF-TPKTVETQSEREKMMFRV 312

Query: 304 EAR 306
           +AR
Sbjct: 313 KAR 315