Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., p-hydroxybenzoic acid efflux pump subunit AaeA from Pseudomonas sp. DMC3

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 53/257 (20%)

Query: 1   MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVR 60
           MK   + L TL  +A+  WIG   ++ Y   P T  G++ +   ++++ V G + +V VR
Sbjct: 1   MKKFFSLLATLLVLALALWIGRTLWEHYMNTPWTRDGRVRADIINVAADVTGEVVEVPVR 60

Query: 61  KGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQ 120
               V+KG L+  +  PE        IA ++A   +A      +R+   +  K   + A 
Sbjct: 61  DNQLVKKGDLLMRI-DPE-----HYRIAVKQAQSLVA------SRKSTWEMRK---VNAH 105

Query: 121 AAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETK 180
             A+L        +NL    V+S++ RD+A            AAL  YQ A         
Sbjct: 106 RRADL--------DNL----VISKENRDDASN-------IADAALADYQHA--------- 137

Query: 181 QAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDT 240
           QA LE A          E     T++++  DG V+ + +H G+ A  G   + VVD    
Sbjct: 138 QAQLEAA----------ELNLKRTEVRAAVDGYVTNLNVHRGDYARIGEAKMAVVDMNSF 187

Query: 241 WAVFNVREDLLKHFTQG 257
           W      E  L H   G
Sbjct: 188 WVYGFFEETKLPHVKVG 204