Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., HlyD family secretion protein from Paraburkholderia sabiae LMG 24235

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 9/238 (3%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK 91
           P T Q +I++    ++++V GR+ +V V    +V+ GQ++F     E+D++  +  A + 
Sbjct: 58  PYTQQARIQAYVVPVAAEVSGRVTRVFVHNNQEVDAGQVLF-----EVDSEPYRIAADRA 112

Query: 92  AAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLY--NDGVVSEQKRDE 149
            A   +   + GA    I +A      A A    A +   R+  LY  ++G VS ++ + 
Sbjct: 113 RADLESTRRQVGASTAGIDSALAGLRAAIANEVKARQDSDRLERLYREDEGTVSLRRLEV 172

Query: 150 AQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSW 209
           A+   + A+   +AA    + A+E  ++   +A   + R AAGA+ + E   A+ +I++ 
Sbjct: 173 ARATHEQAQSQVAAARAEVERARE--QQGGSEAENAQLRSAAGALEKAELDLANARIKAR 230

Query: 210 FDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPAL 267
             G V+ +    G+ A  G PV+T++  +D W   ++ E+ L H   G      L AL
Sbjct: 231 SGGVVTDLRTEVGQFAAAGSPVMTLIAIRDVWISADMTENNLGHLKPGTPVGIALDAL 288



 Score = 23.9 bits (50), Expect = 0.007
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 226 PQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFA 285
           P G  V  VV       ++ +  D    +TQ A+  AY+  +   +  +VT V V  +  
Sbjct: 31  PSGKAVKWVVGLIVVSLIWYLLADRFTPYTQQARIQAYVVPVAAEVSGRVTRVFVHNN-- 88

Query: 286 TWRSTDATQGFDLRTFEVEARP 307
             +  DA Q      FEV++ P
Sbjct: 89  --QEVDAGQVL----FEVDSEP 104