Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 89/327 (27%), Positives = 131/327 (40%), Gaps = 90/327 (27%)

Query: 2   KTVKTTLMTL-TAVAVVGWIGYRFYQAYQPEPVTLQGQIE-SQQYSISSKVPGRIDQVLV 59
           KTV T   T+  +VA +    +R Y       + +QG++E ++   +S KVPG +  + V
Sbjct: 55  KTVATQKKTVPVSVASLEQGTFRHY-------LEVQGKVEFNEDVLVSPKVPGVLTSMRV 107

Query: 60  RKGDQVEKGQLIFTLLSPEIDAK-LEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLK 118
            +GD+V KGQ + T     IDA+ LEQ IA                             +
Sbjct: 108 ERGDRVSKGQTMAT-----IDAQVLEQNIA-----------------------------E 133

Query: 119 AQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREE 178
            +   +LA   Y +  NL++  + +E        Q+  AK                    
Sbjct: 134 VRTRLDLARIAYEKQQNLWDQKIGTEM-------QYLTAK-------------------- 166

Query: 179 TKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQ 238
             + ALE  R  AG   + + Y     I++   G V +V+ ++GE    G  V+ VV+ Q
Sbjct: 167 NNKEALE--RSLAGLQRQRDQY----NIKAPISGVVDEVVPNAGEAVAPGMGVIRVVNLQ 220

Query: 239 DTWAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDL 298
               V  V E       +G Q   + P LNK IE  V  V+         S D T     
Sbjct: 221 GGKIVAEVSEAYQAKINKGDQAVVFFPDLNKEIETTVDVVS--------NSIDPTS---- 268

Query: 299 RTFEVEARPVTPTE-GLRMGMSVVVKL 324
           RTF VE RP    E  LR  M  VV++
Sbjct: 269 RTFTVELRPKDSREITLRPNMVAVVRI 295