Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Membrane-fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  287 bits (735), Expect = 2e-82
 Identities = 147/318 (46%), Positives = 214/318 (67%), Gaps = 1/318 (0%)

Query: 4   VKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGD 63
           V+  L+    VAVV ++ +  ++A+ P+P+ LQGQIE+Q+ ++SSKVPGR+  V V  G 
Sbjct: 7   VQRVLLAFLGVAVVAFLAWGLWKAFTPQPLPLQGQIEAQEINVSSKVPGRVGTVHVHLGQ 66

Query: 64  QVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAA 123
            V+ G L+F L SPE+ AK+ QA A + AA A+A +A  GAR ++++AA+  W +A+  A
Sbjct: 67  TVKAGDLLFELDSPEVAAKIAQARAAEAAASAVAAKANAGARPEEVEAARLNWERAKTGA 126

Query: 124 ELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAA 183
           +LA+ TY RV  ++ +G+++ QKRDEA  QW+AA+    AA   Y++A++GAR E K AA
Sbjct: 127 QLAKTTYDRVQTMFAEGILAGQKRDEALAQWRAAQQQADAARAQYEMARKGARPEDKAAA 186

Query: 184 LEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAV 243
             +A+   G ++E E   A+T+I +   G+VS++ +  GE+APQGFPV+T+V+ QD WAV
Sbjct: 187 QYQAQQVGGVLSEAEVALAETRITAPAAGDVSKIQIQPGEIAPQGFPVITLVNLQDVWAV 246

Query: 244 FNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEV 303
             VRED +  +  G+Q TA +PAL +SIE  V+ V V+ DFATWR+     G DLRTFE+
Sbjct: 247 LQVREDAMADYAVGSQHTAEVPALRRSIELVVSSVGVLPDFATWRAA-RPGGTDLRTFEI 305

Query: 304 EARPVTPTEGLRMGMSVV 321
             RPV P   LR GMSVV
Sbjct: 306 RLRPVAPVAQLRPGMSVV 323