Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., HlyD family secretion protein from Magnetospirillum magneticum AMB-1

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 88/342 (25%), Positives = 140/342 (40%), Gaps = 24/342 (7%)

Query: 1   MKTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVR 60
           MK        L  V+   W  YR+ Q ++    T    ++    +IS KV G + ++L R
Sbjct: 1   MKKPIAIAAALVLVSFGSWSAYRWSQEWRWMESTDDAYVDGDITTISPKVAGHVVELLAR 60

Query: 61  KGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQ 120
               V KG ++  +   +  A+L++A    KA  A   + ++    Q+    +     + 
Sbjct: 61  DNRAVAKGDVLVRIDERDYRARLDEAAGQVKARLAQLIQIDDRVAVQEAVITQSGASISA 120

Query: 121 AAAEL--AEKTYLRVNNLYNDGVVSEQKRDEAQT---QWQAAKYTESAALQMY--QLAKE 173
           A AE+  A+  Y R   L  +  VS Q+ D  Q    + +A      A LQ    QL+  
Sbjct: 121 ARAEMVRAKADYERSRALVREDYVSRQRFDITQADAARAEAGLTGSGAGLQAARRQLSVL 180

Query: 174 GAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVT 233
            +      A LE+A+ A   VAE E  A  T I+S  DG +    +  G+    G  ++ 
Sbjct: 181 ASERNVALAQLEQAK-ATLVVAETELEA--TTIRSPVDGVIGNRAVRDGQYVRPGQTLLA 237

Query: 234 VVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKSI---EFKVTHVAVMGDFATWRST 290
           VV   + W   N +E  +   T G +    + A   ++          A    F+     
Sbjct: 238 VVPLGNVWIDANFKETQIGRMTPGNRVEIKVDAFPGAVIGGSVDSFAPASGAKFSLLPPE 297

Query: 291 DATQGFDLRTFEVEARPV-------TPTEG-LRMGMSVVVKL 324
           +AT  F   T  V+  PV       +P  G LR G+SVVVK+
Sbjct: 298 NATGNF---TKVVQRIPVRIRVDQDSPLAGQLRPGLSVVVKV 336