Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., secretion protein HlyD from Serratia liquefaciens MT49

 Score = 79.7 bits (195), Expect = 9e-20
 Identities = 83/319 (26%), Positives = 134/319 (42%), Gaps = 13/319 (4%)

Query: 9   MTLTAVAVVG-WIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEK 67
           + L A AV G W    +YQ  Q +P+TL G ++ +  ++  +V GR+  + V +GD ++ 
Sbjct: 13  IVLIAAAVYGVW----YYQQQQDKPLTLYGNVDIRTVNLGFRVDGRLASLTVDEGDALQP 68

Query: 68  GQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAE 127
           GQL+  L        L+QA A   +A A       G R ++I   + +  +  +A   A+
Sbjct: 69  GQLLGKLDDAPYINALQQAQANVGSAKAKLALLLAGYRTEEIAQVRSEMAQRLSAFSYAD 128

Query: 128 KTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKA 187
               R   L+     S    ++A+T    A+    A+        +G R +  + A    
Sbjct: 129 SYLKRQQGLWAKNATSADALEDARTARNQAQANLQASKDKLAQYLKGNRPQEIEEAKANL 188

Query: 188 RMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVR 247
             +  A+A+ +    DT + S   G V    +  G +   G  V T+  T+  W    V 
Sbjct: 189 AQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLNAGGTVFTLSLTRPVWVRAYVN 248

Query: 248 EDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEAR 306
           E  L   T G +   Y  +  NK    K+  V+   +F T +S +     DLRT  V   
Sbjct: 249 EANLGKATPGTELEIYTDSRPNKPYHGKIGFVSPTAEF-TPKSVETP---DLRTDLVYRL 304

Query: 307 PVTPT---EGLRMGMSVVV 322
            V  T   + LR GM V V
Sbjct: 305 RVIVTDADDALRQGMPVTV 323