Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 84/325 (25%), Positives = 139/325 (42%), Gaps = 10/325 (3%)

Query: 5   KTTLMTLTAVAVVGWI--GYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKG 62
           K  ++ L   A+V  I  G  +YQ+ Q + +TL G ++ +  +IS +V GR+  + V +G
Sbjct: 3   KPVVIGLAIAAIVAVIAGGTWWYQSRQDDGLTLYGNVDIRTVNISFRVGGRLASLNVDEG 62

Query: 63  DQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAA 122
           D ++ GQ++  L     +  L QA AG   A A       G R+++I  A     +AQAA
Sbjct: 63  DTIKAGQVLGELDHAPYENALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVRQAQAA 122

Query: 123 AELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQA 182
            + A+  Y R   L+    +S    + A++    A+ T  +A       + G RE+    
Sbjct: 123 YDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQ 182

Query: 183 ALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWA 242
           A      A   +A+ +    DT + +  +G +    +  G +   G  V+T+  T+  W 
Sbjct: 183 AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGSTVLTLSLTRPVWV 242

Query: 243 VFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTF 301
              V E  L     G     Y     +K    K+  V+   +F    +    +  DLRT 
Sbjct: 243 RAYVDERNLSQTQPGRDILLYTDGRPDKPYHGKIGFVSPTAEF----TPKTVETPDLRTD 298

Query: 302 EVEARPVTPT---EGLRMGMSVVVK 323
            V    +  T   + LR GM V VK
Sbjct: 299 LVYRLRIIVTDADDALRQGMPVTVK 323