Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 9/240 (3%)

Query: 11  LTAVAVVGWIGYRFYQAYQPEPVTLQ-GQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQ 69
           L AVA + W  +    A  PE      G+IE+ +  I++K+ GRID +LV +G  V +G+
Sbjct: 16  LVAVAAIAW--WMLRPAGIPEGFAASNGRIEATEVDIATKIAGRIDTILVSEGQFVRQGE 73

Query: 70  LIFTLLSPEIDAKLEQAIAGQKAA--GALAQEAENGAREQQIQAAKDQWLKAQAAAELAE 127
           ++  + +  +  +  +AIA  K A     A  A    R+ +++AA+    + +A  +   
Sbjct: 74  VLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVVKQREAELDSVS 133

Query: 128 KTYLRVNNLYNDGVVSEQKRDE---AQTQWQAAKYTESAALQMYQLAKEGAREETKQAAL 184
           K ++R  +L   G VS Q+ D+   A    +AA  T  A +   + A E AR    QA  
Sbjct: 134 KRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIEAARTSIIQAQ- 192

Query: 185 EKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVF 244
            +   A      + A   D+++++  DG V   +   GE+   G  V+ +VD  D +  F
Sbjct: 193 TRVEAAQATERRIVADIDDSELKAPRDGRVQYRVAEPGEVLSAGGRVLNMVDLSDVYMTF 252