Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., predicted HlyD family secretion protein (NCBI) from Escherichia coli BW25113

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 9/240 (3%)

Query: 11  LTAVAVVGWIGYRFYQAYQPEPVTLQ-GQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQ 69
           L   A+V W  +    A  PE   +  G+IE+ +  I+SK+ GRID +LV++G  V +G+
Sbjct: 16  LAVAAIVAW--WLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGE 73

Query: 70  LIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAEL--AE 127
           ++  + +  +  +  +AIA  K A +    A+    ++Q +    Q L  Q  AEL    
Sbjct: 74  VLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVA 133

Query: 128 KTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYT-ESAALQM--YQLAKEGAREETKQAAL 184
           K + R  +L   G +S Q+ D+ +   ++A+   ESA  Q+   + A E AR    QA  
Sbjct: 134 KRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQ- 192

Query: 185 EKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVF 244
            +   A      + A   D+++++  DG V   +   GE+   G  V+ +VD  D +  F
Sbjct: 193 TRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTF 252