Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score = 90.1 bits (222), Expect = 7e-23
 Identities = 85/326 (26%), Positives = 140/326 (42%), Gaps = 9/326 (2%)

Query: 2   KTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRK 61
           K V   L  +   AVV   GY +YQ+ Q   +TL G ++ +  ++S +V GR++ + V +
Sbjct: 4   KPVVIGLAVVVLAAVVAG-GYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDE 62

Query: 62  GDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQA 121
           GD ++ GQ++  L     +  L QA AG   A A       G R ++I  A     +AQA
Sbjct: 63  GDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQA 122

Query: 122 AAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQ 181
           A + A+  Y R   L+    +S    + A++    A+ T  +A    +  + G RE+   
Sbjct: 123 AYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIA 182

Query: 182 AALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
            A      A   +A+ E    D+ + +  DG +    +  G +  +G  V TV  T+  W
Sbjct: 183 QAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVW 242

Query: 242 AVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT 300
               V E  L     G +   Y     +K    ++  V+   +F    +    +  DLRT
Sbjct: 243 VRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEF----TPKTVETPDLRT 298

Query: 301 FEVEARPVTPT---EGLRMGMSVVVK 323
             V    +  T   + LR GM V V+
Sbjct: 299 DLVYRLRIVVTDADDALRQGMPVTVQ 324