Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 44/254 (17%)

Query: 37  GQIESQ-QYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGA 95
           G +E++ QY +   +PGR+  + V  GDQV KGQL+  + S +++ ++E           
Sbjct: 67  GTVEARYQYKVGPTIPGRVQTLKVDIGDQVTKGQLLGVMDSVDLEQRME----------- 115

Query: 96  LAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQ 155
                   A++  +  AK +  +AQ   + +++ + R   L     +SE++    Q  + 
Sbjct: 116 --------AQQSALMQAKAKLQEAQTRYQFSDEQFKRYQKLLESNSISEEQFLVKQQDYH 167

Query: 156 AAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVS 215
            A+   +AA Q      E  R+E +Q A+             +A   +  + S  DG V 
Sbjct: 168 IAEAGLAAARQ------ELLRQEAEQKAM-------------QAQQHNLDLISPIDGIVV 208

Query: 216 QVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKS---IE 272
           +     G     G  V+ +++ +D W   NVR D +         TA +   +KS   + 
Sbjct: 209 KRNAEQGTTVVAGQSVIEIINPEDIW--INVRFDQIHSTGLNPGLTALVNLRSKSKLDLS 266

Query: 273 FKVTHVAVMGDFAT 286
            K+  V  + D  T
Sbjct: 267 GKIYRVEPIADAVT 280