Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., efflux RND transporter periplasmic adaptor subunit from Fusobacterium nucleatum SB010

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 52/200 (26%)

Query: 41  SQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEA 100
           +Q+  ++ K  G+I  +    GD V+KGQ+I T+   +    LE                
Sbjct: 53  TQKTVLAFKYAGKIKSINFESGDFVKKGQVIATMDDKDYKVNLE---------------- 96

Query: 101 ENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYT 160
              A  ++ +AAK       A A+ AE  + R   LY    ++++  D A  Q       
Sbjct: 97  ---AFSKKYEAAK-------AVAQNAETQFARAEKLYKGEALAKKDYDNALMQ------- 139

Query: 161 ESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMH 220
           ++ A+  ++ A  G         LE AR              DTKI + +DG + + ++ 
Sbjct: 140 KNVAISTFKEASAG---------LENARNTLN----------DTKIIAPYDGYIDKKIVE 180

Query: 221 SGELAPQGFPVVTVVDTQDT 240
            G + P+G PV++ +  + T
Sbjct: 181 VGTVVPEGGPVISFISNEIT 200