Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Erwinia tracheiphila SCR3

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 6/243 (2%)

Query: 46  ISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAR 105
           +++    +ID +L+ KGD+V+ GQL+  +     +  LE+A     A  A  +  ++G R
Sbjct: 25  LAANETAKIDTLLINKGDRVKAGQLLVKMERFTAENALEKAEKNYLAEVATLRNLQSGER 84

Query: 106 EQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAAL 165
             ++     Q  KA++ AE A++   R   L+   V+S  + + A+  +   +       
Sbjct: 85  PAELNIIHSQLQKARSVAEQAQRQLERYQALFRTKVISATEWENAREDYAQKRAQVDELF 144

Query: 166 QMYQLAKEGARE---ETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSG 222
              +  K  ARE     +QA +E AR+      + +      +I S  D +V  +L   G
Sbjct: 145 HQLEAKKLPAREAEIHRQQAIVESARVQRD---KADWDIRQLEIVSPQDAKVFDILYRPG 201

Query: 223 ELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMG 282
           E    G P+V+++   +    F V E ++     G +   Y    +  +   + +++   
Sbjct: 202 ERPLAGRPIVSLLPEGNVKVRFFVPEKVVGVLRTGMKVRIYFDGYSGYVPCLLNYISPQA 261

Query: 283 DFA 285
           +++
Sbjct: 262 EYS 264