Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Multidrug resistance efflux pump from Enterobacter asburiae PDN3

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 13/231 (5%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQA-IAGQ 90
           P+T    +      +S +V G +  V V    QV+KG L+F L       K+E A IA +
Sbjct: 33  PLTPDSTVMRVVTPVSPRVSGYVAAVHVHNNSQVKKGDLLFELDDTPFRNKVEAAQIALE 92

Query: 91  KAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEA 150
           +A         N   + QI AA+     A   A   + T+ R   L     VS+   D+ 
Sbjct: 93  QA------RLSNEQLDAQIAAAQASLKTAVLTARNDKVTFDRYQKLSTLQNVSQADLDKV 146

Query: 151 QTQWQAAKYT-ESAALQMYQL-AKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQS 208
           +T WQ+++ +  S    ++ L  + G R+E +   L+K R    A+ E E     TK+ +
Sbjct: 147 RTTWQSSEQSVSSIQANIHNLRIQRGERDEHRNVTLQKYR---NALDEAELNLGWTKVYA 203

Query: 209 WFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQ 259
             DG VS + +  G  A  G   + +V+ Q T  V + RE  L+H  QG +
Sbjct: 204 QADGTVSNLQLSPGFYASSGSAALALVNNQ-TDIVADFREKSLRHTHQGTE 253