Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Multidrug resistance efflux pump from Enterobacter asburiae PDN3

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 94/352 (26%), Positives = 153/352 (43%), Gaps = 53/352 (15%)

Query: 7   TLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYS------ISSKVPGRIDQVLVR 60
           ++ T  A+ +VG +   +  A+Q  P T   Q     Y       IS +V G I +V V+
Sbjct: 21  SVFTAAAIGIVGVLVILY--AWQLPPFTRHAQFTDNAYVRGQTTFISPQVNGYITEVKVQ 78

Query: 61  KGDQVEKGQL-------IFTLLSPEIDAKLEQAIAG-----QKAAGALAQEAENGAREQQ 108
              QV+KG L       I+     + +A+L   IA      Q+   A A  A+N A    
Sbjct: 79  DFVQVKKGDLLLQIDDRIYRQRVHQAEAQLAMKIAALNNNLQQRKSAEATIAKNDAA--- 135

Query: 109 IQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMY 168
           ++ A+ Q LK QA  +       RV +L  DG +S ++RD A     A+    SA ++  
Sbjct: 136 LKNARAQSLKTQADLK-------RVKDLTADGSLSIRERDAAL----ASAAQGSADIEQA 184

Query: 169 QLAKEGAREETKQAALEKARMAA---GAVAEVEAYAAD---TKIQSWFDGEVSQVLMHSG 222
           + + E +R++ +   + +  + A    A A +E    D   T+I +  DG++ Q+ +  G
Sbjct: 185 KASLEMSRQDLQTVIVNRGALEADVENAKAALELAQIDLQNTRITAPRDGQLGQIAVRLG 244

Query: 223 ELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHV--- 278
                G  + T+V  Q  W + N++E  L     G      + AL NK+ + +V  +   
Sbjct: 245 AYVTAGTHLTTLVPPQH-WVIANIKETQLAELRVGQPVKFTVDALNNKAYQGRVESISPA 303

Query: 279 ------AVMGDFATWRSTDATQGFDLRTFEVEARPVTPTEGLRMGMSVVVKL 324
                 A+  D AT       Q   +R  EV  +P   +  LR GMSV V +
Sbjct: 304 TGVEFSAITPDNATGNFVKIAQRIPVR-IEVLGKP-EESALLRPGMSVQVTI 353