Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., secretion protein HlyD from Escherichia coli ECRC101

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 9/326 (2%)

Query: 2   KTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRK 61
           K V   L  +   AVV   GY +YQ+ Q   +TL G ++ +  ++S +V GR++ + V +
Sbjct: 3   KPVVIGLAVVVLAAVVAG-GYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDE 61

Query: 62  GDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQA 121
           GD ++ GQ++  L     +  L QA AG   A A       G R+++I  A     +AQA
Sbjct: 62  GDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQA 121

Query: 122 AAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQ 181
           A + A+  Y R   L+    +S    + A++    A+ T  +A    +  + G RE+   
Sbjct: 122 AYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIA 181

Query: 182 AALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
            A      A   +A+ E    D+ + +  DG +    +  G +  +G  V TV  T+  W
Sbjct: 182 QAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVW 241

Query: 242 AVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT 300
               V E  L     G +   Y     +K    ++  V+   +F    +    +  DLRT
Sbjct: 242 VRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEF----TPKTVETPDLRT 297

Query: 301 FEVEARPVTPT---EGLRMGMSVVVK 323
             V    +  T   + LR GM V V+
Sbjct: 298 DLVYRLRIVVTDADDALRQGMPVTVQ 323