Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Uncharacterized protein YdhJ from Escherichia coli ECRC101

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 59/280 (21%), Positives = 116/280 (41%), Gaps = 58/280 (20%)

Query: 1   MKTVK--TTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVL 58
           +KT+K  +T++      + GW  + +Y      P T  G+I ++Q SI+ +V GRI ++ 
Sbjct: 3   IKTIKYFSTIIVAVVAVLAGWWLWNYYMQ---SPWTRDGKIRAEQVSITPQVSGRIVELN 59

Query: 59  VRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLK 118
           ++    V  G L+ T+                K    +A+                  L 
Sbjct: 60  IKDNQLVNAGDLLLTI---------------DKTPFQIAE------------------LN 86

Query: 119 AQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREE 178
           AQA    A+    + NN  N       +R      + +A+  ++A L +          +
Sbjct: 87  AQAQLAKAQSDLAKANNEAN-------RRRHLSQNFISAEELDTANLNV----------K 129

Query: 179 TKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQ 238
             QA+++ A+     + + +   A T+I++   G V+ +    G+ A  G P+  +VD+ 
Sbjct: 130 AMQASVDAAQ---ATLKQTQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSH 186

Query: 239 DTWAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTHV 278
             + +    E  L+H  +GA     L + NK+++  V+ +
Sbjct: 187 SFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSI 226