Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., secretion protein HlyD from Dickeya dianthicola ME23

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 3/324 (0%)

Query: 2   KTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRK 61
           KT    ++ L AV   G+ G   Y++ Q  P+TL G ++ +  ++  +V GR+  + V +
Sbjct: 4   KTGLWLVLALIAVTAAGY-GLMQYRSQQDAPLTLYGNVDIRSVNLGFRVGGRLAGLNVDE 62

Query: 62  GDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQA 121
           GD ++ GQL+  L S  +  +L QA A   +A A       G R ++I   + Q  +AQA
Sbjct: 63  GDAIQPGQLLARLDSAPLQNELRQAKAHVASAQAQLALLREGYRSEEIAQVRSQQEQAQA 122

Query: 122 AAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQ 181
           A + A   Y R   L+    ++    ++A++    A+ T  AA +     + G R +   
Sbjct: 123 AYDYANSFYQRQLGLWKQHTLAANALEDARSTRNQAQATLQAAREKLNQYQRGNRPQEIA 182

Query: 182 AALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
           AA      A    A+ +    DT++ +   G +    + +G +   G  V T+  TQ  W
Sbjct: 183 AADAALAQALATEAQAQLNLQDTRLYAPSSGVILTRAVEAGSMLSAGSTVFTLSLTQPVW 242

Query: 242 AVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT 300
               V E  L     G +   Y     N+    ++  V+   +F T ++ + T+      
Sbjct: 243 IRAYVNETQLGRAAPGREVQIYTDGRPNRPYHGRIGFVSPSAEF-TPKNVETTELRTDLV 301

Query: 301 FEVEARPVTPTEGLRMGMSVVVKL 324
           + +        +GLR GM V + L
Sbjct: 302 YRLRIIVSDADDGLRQGMPVTLTL 325