Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., secretion protein HlyD from Dickeya dianthicola 67-19

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 3/318 (0%)

Query: 8   LMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEK 67
           ++ L AV   G+ G   Y++ Q  P+TL G ++ +  ++  +V GR+  + V +GD ++ 
Sbjct: 10  VLALIAVTAAGY-GLMQYRSQQDAPLTLYGNVDIRSVNLGFRVGGRLAGLNVDEGDAIQP 68

Query: 68  GQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAE 127
           GQL+  L S  +  +L QA A   +A A       G R ++I   + Q  +AQAA + A 
Sbjct: 69  GQLLARLDSAPLQNELRQAQAQVASAQAQLALLREGYRSEEIAQVRSQLEQAQAAYDYAN 128

Query: 128 KTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKA 187
             Y R   L+    ++    ++A++    A+ T  AA +     + G R +   AA    
Sbjct: 129 SFYQRQLGLWKQHTLAANALEDARSTRNQAQATLQAAREKLNQYQRGNRPQEIAAADAAL 188

Query: 188 RMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVR 247
             A    A+ +    DT++ +   G +      +G +   G  V T+  TQ  W    V 
Sbjct: 189 AQAQATEAQAQLNLQDTRLYAPSSGVILTRAAEAGSMLSAGSTVFTLSLTQPVWIRAYVN 248

Query: 248 EDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEAR 306
           E  L     G +   Y     N+    ++  V+   +F T ++ + T+      + +   
Sbjct: 249 ETQLGRAAPGREVQIYTDGRPNRPYHGRIGFVSPSAEF-TPKNVETTELRTDLVYRLRII 307

Query: 307 PVTPTEGLRMGMSVVVKL 324
                +GLR GM V + L
Sbjct: 308 VSDADDGLRQGMPVTLTL 325