Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Bacteroides stercoris CC31F

 Score =  261 bits (667), Expect = 2e-74
 Identities = 142/315 (45%), Positives = 200/315 (63%), Gaps = 4/315 (1%)

Query: 9   MTLTAV-AVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEK 67
           +TLT V A+V  +G+   +     P  +QGQ E  +Y +SSKVPGRI +  V++G  V+ 
Sbjct: 15  LTLTGVIAIVALVGFFMLRK---GPEIIQGQAEVTEYRVSSKVPGRILEFRVKEGQSVQA 71

Query: 68  GQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAE 127
           G  +  L +P++ AKLEQA A + AA A  ++A  GAR++QIQAA + W KA+A   +AE
Sbjct: 72  GDTLAILEAPDVQAKLEQARAAEAAAQAQNEKALKGARQEQIQAAYEIWQKARAGLAIAE 131

Query: 128 KTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKA 187
           K+Y RV NL++ GV+S QK DE   Q  AA+ TE AA   Y +AK GA  E K AA    
Sbjct: 132 KSYKRVKNLHDQGVMSAQKLDEVTAQRDAAQATEKAAQAQYTMAKNGAEREDKAAAAALV 191

Query: 188 RMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVR 247
             A GAVAEVE+Y  +T + +   GEVS++   +GEL   G P++ +    D W  FNVR
Sbjct: 192 ERAKGAVAEVESYIRETCLIAQTAGEVSEIFPKTGELVGTGAPIMNIAVMDDMWVTFNVR 251

Query: 248 EDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARP 307
           EDLL+    G +F A++PAL+++I  KV ++  +G +A W++T  T  FDL+TFEV+A P
Sbjct: 252 EDLLQGLGMGTEFEAFIPALDRNIRLKVYYLKDLGTYAAWKATKTTGQFDLKTFEVKASP 311

Query: 308 VTPTEGLRMGMSVVV 322
           +  TEGLR GMSV++
Sbjct: 312 LEKTEGLRPGMSVIL 326