Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., efflux RND transporter periplasmic adaptor subunit from Phocaeicola dorei CL03T12C01

 Score =  280 bits (715), Expect = 4e-80
 Identities = 147/316 (46%), Positives = 212/316 (67%), Gaps = 4/316 (1%)

Query: 9   MTLTAVAV-VGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEK 67
           ++LTAV V V  IG+ F     PE   +QGQ E+ +Y +SSKVPGRI +  V++GD+V+ 
Sbjct: 15  ISLTAVIVIVSLIGF-FTLGKGPE--IIQGQAEADEYRVSSKVPGRILEFRVKEGDKVKA 71

Query: 68  GQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAE 127
           G  +  L +P++ AKL QA A ++AA AL ++A+ G R++Q+QAA + W KA+A  E+AE
Sbjct: 72  GDTLAILEAPDVKAKLSQAQAAEQAAQALNEKAQRGTRQEQLQAAYEIWQKAKAGVEIAE 131

Query: 128 KTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKA 187
           K+Y RVN L+ +GV+S QKRDEA+ Q+ A   TE AA   Y++AK GA+ E K AA  + 
Sbjct: 132 KSYNRVNRLFEEGVMSAQKRDEAKAQFDAMSATEKAARSQYEMAKNGAQREDKAAAAAQV 191

Query: 188 RMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVR 247
             A GAVAEV +Y  +T + +  DGEV+++   +GEL   G P++ V    D W  FNVR
Sbjct: 192 ERAKGAVAEVSSYIDETILTASADGEVTEIFPKAGELVGTGAPIMNVARLNDMWVTFNVR 251

Query: 248 EDLLKHFTQGAQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARP 307
           ED LK FT G +  A++PA +K I+FK+T++  +G +A W++T  T  FDL+TFEV+A P
Sbjct: 252 EDFLKDFTVGNEINAFIPAFDKEIKFKITYMKDLGTYAAWKATKTTGQFDLKTFEVKAVP 311

Query: 308 VTPTEGLRMGMSVVVK 323
           V  T+GLR GMS +++
Sbjct: 312 VERTDGLRPGMSAIIE 327