Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., putative membrane fusion protein (MFP) component of efflux pump, membrane anchor from Escherichia coli BL21

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 9/326 (2%)

Query: 2   KTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRK 61
           K V   L  +   AVV   GY +YQ+ Q   +TL G ++ +  ++S +V GR++ + V +
Sbjct: 4   KPVVIGLAVVVLAAVVAG-GYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDE 62

Query: 62  GDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQA 121
           GD ++ GQ++  L     +  L QA AG   A A       G R+++I  A     +AQA
Sbjct: 63  GDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQA 122

Query: 122 AAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQ 181
           A + A+  Y R   L+    +S    + A++    A+ T  +A    +  + G RE+   
Sbjct: 123 AYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIA 182

Query: 182 AALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
            A      A   +A+ E    D+ + +  DG +    +  G +  +G  V TV  T+  W
Sbjct: 183 QAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVW 242

Query: 242 AVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT 300
               V E  L     G +   Y     +K    ++  V+   +F    +    +  DLRT
Sbjct: 243 VRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEF----TPKTVETPDLRT 298

Query: 301 FEVEARPVTPT---EGLRMGMSVVVK 323
             V    +  T   + LR GM V V+
Sbjct: 299 DLVYRLRIVVTDADDALRQGMPVTVQ 324