Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 60/253 (23%), Positives = 100/253 (39%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK 91
           P    G +E +   I++   G ++ + V +G QV  G  +F +      A+ ++  A   
Sbjct: 29  PPLAHGYVEGEYLRIAAPSAGMLESLSVARGAQVAAGAPLFAIDRATARAERDRLAAALA 88

Query: 92  AAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQ 151
            A A   +   G R Q++     Q  +A+AA   +     R   L    V S  K D+A+
Sbjct: 89  QARAQRADLATGKRAQEVAVLTAQKARAEAALRYSTAELARQQELVARKVSSPDKLDQAR 148

Query: 152 TQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFD 211
             +   +   + A     +A   AR E  +AA E    A  A+A+ E   AD    +   
Sbjct: 149 AAFDRDRGQLAEADAQLAVAALPARPEQLRAADEAVTQAEAALAQAERRLADLAPVAPVA 208

Query: 212 GEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKSI 271
             V   L + GE  P G PVV+++  +    V  V E  L     G   +         +
Sbjct: 209 ALVEDTLYNPGEWVPAGSPVVSLLPPERVKLVLFVPETALAGVVPGGALSVRCDGCPAGL 268

Query: 272 EFKVTHVAVMGDF 284
             +VT +A   ++
Sbjct: 269 SARVTRIASQAEY 281